SHANNON IRENE STEINFADT
Pilots at Timber Rdg Rd, Los Alamos, NM
License number
New Mexico A5206217
Issued Date
Sep 2014
Expiration Date
Sep 2019
Category
Airmen
Type
Authorized Aircraft Instructor
Address
Address
14 Timber Ridge Rd, Los Alamos, NM 87544
Personal information
See more information about SHANNON IRENE STEINFADT at radaris.comName
Address
Phone
14 Timber Ridge Rd, Los Alamos, NM 87544
Professional information
Computer-Facilitated Parallel Information Alignment And Analysis
US Patent:
2012023, Sep 20, 2012
Filed:
Mar 16, 2012
Appl. No.:
13/423085
Inventors:
Shannon I. Steinfadt - Los Alamos NM, US
Assignee:
Los Alamos National Security, LLC - Los Alamos NM
International Classification:
G06F 7/00, G06F 17/30
US Classification:
707803, 707E17044
Abstract:
Described herein, Smith-Waterman using Associative Massive Parallelism (SWAMP) extends the single, highest scoring subsequence alignment the traditional Smith-Waterman algorithm and variations return to discover the top k highest scoring non-overlapping, non-intersecting subalignments in parallel. Embodiments provided herein provide synergistic work, accelerating the high quality of alignments, in addition to providing multiple subsequence discovery that is handled in an automated fashion within the algorithm. SWAMP and SWAMP+ (and related algorithms such as are described herein) are parallel algorithms that are designed to run in an accelerated manner, inter alia, on single-instruction, multiple-data (SIMD) machines. Not only is the alignment/matching process accelerated for the single, highest matching alignment, in embodiments the algorithm can analyze deeper into the sequences for additional high-quality alignments. Envisioned uses include bioinformatics, for instance for nucleic acid or amino acid sequence alignments, as well as alignments of other data strings or other packets or lines of information.